UniProt

Proteomes REST API

Provides access to UniProt proteomes — the complete or near-complete sets of proteins from fully sequenced organisms. Supports retrieval of reference proteomes and gene-centric proteome data. Useful for whole- organism proteomics and comparative genomics workflows.

GitHub

Documentation

📖
Documentation
https://www.uniprot.org/help/proteomes

Other Resources

🔗
TermsOfService
https://www.uniprot.org/help/license

API entry from apis.yml

apis.yml Raw ↑ 
name: Proteomes REST API
description: 'Provides access to UniProt proteomes — the complete or near-complete sets of proteins from
  fully sequenced organisms. Supports retrieval of reference proteomes and gene-centric proteome data.
  Useful for whole- organism proteomics and comparative genomics workflows.

  '
image: https://www.uniprot.org/images/logos/uniprot.svg
humanURL: https://www.uniprot.org/help/proteomes
baseURL: https://rest.uniprot.org/proteomes
version: '2026_01'
tags:
- Proteomes
- Genomics
- Comparative Biology
properties:
- type: Documentation
  url: https://www.uniprot.org/help/proteomes
- type: TermsOfService
  url: https://www.uniprot.org/help/license
contact:
- FN: UniProt Consortium
  email: [email protected]
  url: https://www.uniprot.org/contact