Amazon HealthOmics

AWS HealthOmics API

The AWS HealthOmics API provides programmatic access to manage omics storage, workflows, run groups, annotation stores, and variant stores for genomics and other omics data analysis.

GitHub OpenAPI

Documentation

📖
Documentation
https://docs.aws.amazon.com/omics/latest/api/Welcome.html
📖
GettingStarted
https://aws.amazon.com/healthomics/getting-started/
📖
APIReference
https://docs.aws.amazon.com/omics/latest/api/Welcome.html
📖
Authentication
https://docs.aws.amazon.com/omics/latest/api/CommonParameters.html

Specifications

⚙
OpenAPI
https://raw.githubusercontent.com/api-evangelist/amazon-healthomics/refs/heads/main/openapi/amazon-healthomics-openapi.yaml

Schemas & Data

📊
JSONSchema
https://raw.githubusercontent.com/api-evangelist/amazon-healthomics/refs/heads/main/json-schema/healthomics-abort-multipart-read-set-upload-request-schema.json

Other Resources

🔗
Pricing
https://aws.amazon.com/healthomics/pricing/
🔗
FAQ
https://aws.amazon.com/healthomics/faqs/
🔗
JSONLD
https://raw.githubusercontent.com/api-evangelist/amazon-healthomics/refs/heads/main/json-ld/amazon-healthomics-context.jsonld

OpenAPI Specification

amazon-healthomics-openapi.yaml Raw ↑ 
openapi: 3.0.0
info:
  version: '2022-11-28'
  x-release: v4
  title: Amazon Omics
  description: 'This is the <i>AWS HealthOmics API Reference</i>. For an introduction to the service, see <a href="https://docs.aws.amazon.com/omics/latest/dev/">What is AWS HealthOmics?</a> in the <i>AWS
    HealthOmics User Guide</i>.'
  x-logo:
    url: 'https://twitter.com/awscloud/profile_image?size=original'
    backgroundColor: '#FFFFFF'
  termsOfService: 'https://aws.amazon.com/service-terms/'
  contact:
    name: Mike Ralphson
    email: [email protected]
    url: 'https://github.com/mermade/aws2openapi'
    x-twitter: PermittedSoc
  license:
    name: Apache 2.0 License
    url: 'http://www.apache.org/licenses/'
  x-providerName: amazonaws.com
  x-serviceName: omics
  x-aws-signingName: omics
  x-origin:
  - contentType: application/json
    url: 'https://raw.githubusercontent.com/aws/aws-sdk-js/master/apis/omics-2022-11-28.normal.json'
    converter:
      url: 'https://github.com/mermade/aws2openapi'
      version: 1.0.0
    x-apisguru-driver: external
  x-apiClientRegistration:
    url: 'https://portal.aws.amazon.com/gp/aws/developer/registration/index.html?nc2=h_ct'
  x-apisguru-categories:
  - cloud
  x-preferred: true
externalDocs:
  description: Amazon Web Services documentation
  url: 'https://docs.aws.amazon.com/omics/'
servers:
- url: 'http://omics.{region}.amazonaws.com'
  variables:
    region:
      description: The AWS region
      enum:
      - us-east-1
      - us-east-2
      - us-west-1
      - us-west-2
      - us-gov-west-1
      - us-gov-east-1
      - ca-central-1
      - eu-north-1
      - eu-west-1
      - eu-west-2
      - eu-west-3
      - eu-central-1
      - eu-south-1
      - af-south-1
      - ap-northeast-1
      - ap-northeast-2
      - ap-northeast-3
      - ap-southeast-1
      - ap-southeast-2
      - ap-east-1
      - ap-south-1
      - sa-east-1
      - me-south-1
      default: us-east-1
  description: The Amazon Omics multi-region endpoint
- url: 'https://omics.{region}.amazonaws.com'
  variables:
    region:
      description: The AWS region
      enum:
      - us-east-1
      - us-east-2
      - us-west-1
      - us-west-2
      - us-gov-west-1
      - us-gov-east-1
      - ca-central-1
      - eu-north-1
      - eu-west-1
      - eu-west-2
      - eu-west-3
      - eu-central-1
      - eu-south-1
      - af-south-1
      - ap-northeast-1
      - ap-northeast-2
      - ap-northeast-3
      - ap-southeast-1
      - ap-southeast-2
      - ap-east-1
      - ap-south-1
      - sa-east-1
      - me-south-1
      default: us-east-1
  description: The Amazon Omics multi-region endpoint
- url: 'http://omics.{region}.amazonaws.com.cn'
  variables:
    region:
      description: The AWS region
      enum:
      - cn-north-1
      - cn-northwest-1
      default: cn-north-1
  description: The Amazon Omics endpoint for China (Beijing) and China (Ningxia)
- url: 'https://omics.{region}.amazonaws.com.cn'
  variables:
    region:
      description: The AWS region
      enum:
      - cn-north-1
      - cn-northwest-1
      default: cn-north-1
  description: The Amazon Omics endpoint for China (Beijing) and China (Ningxia)
x-hasEquivalentPaths: true
paths:
  '/sequencestore/{sequenceStoreId}/upload/{uploadId}/abort':
    delete:
      operationId: AbortMultipartReadSetUpload
      description: ' Stops a multipart upload. '
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AbortMultipartReadSetUploadResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: NotSupportedOperationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/NotSupportedOperationException'
        '482':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '483':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '484':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: sequenceStoreId
        in: path
        required: true
        description: ' The sequence store ID for the store involved in the multipart upload. '
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 10
          maxLength: 36
      - name: uploadId
        in: path
        required: true
        description: ' The ID for the multipart upload. '
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 10
          maxLength: 36
      summary: Amazon HealthOmics Abort Multipart Read Set Upload
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
  '/sequencestore/{sequenceStoreId}/readset/batch/delete':
    post:
      operationId: BatchDeleteReadSet
      description: Deletes one or more read sets.
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/BatchDeleteReadSetResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '482':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '483':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '484':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '485':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: sequenceStoreId
        in: path
        required: true
        description: The read sets' sequence store ID.
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 10
          maxLength: 36
      requestBody:
        required: true
        content:
          application/json:
            schema:
              type: object
              required:
              - ids
              properties:
                ids:
                  description: The read sets' IDs.
                  type: array
                  items:
                    $ref: '#/components/schemas/ReadSetId'
                  minItems: 1
                  maxItems: 100
      summary: Amazon HealthOmics Batch Delete Read Set
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
  '/import/annotation/{jobId}':
    delete:
      operationId: CancelAnnotationImportJob
      description: Cancels an annotation import job.
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/CancelAnnotationImportResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '482':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '483':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '484':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
      parameters:
      - name: jobId
        in: path
        required: true
        description: The job's ID.
        schema:
          type: string
          pattern: '[a-f0-9]{8}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{12}'
      summary: Amazon HealthOmics Cancel Annotation Import Job
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
    get:
      operationId: GetAnnotationImportJob
      description: Gets information about an annotation import job.
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/GetAnnotationImportResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '482':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '483':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '484':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
      parameters:
      - name: jobId
        in: path
        required: true
        description: The job's ID.
        schema:
          type: string
          pattern: '[a-f0-9]{8}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{12}'
      summary: Amazon HealthOmics Get Annotation Import Job
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
  '/run/{id}/cancel':
    post:
      operationId: CancelRun
      description: Cancels a run.
      responses:
        '202':
          description: Success
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '482':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '483':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '484':
          description: ConflictException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ConflictException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: id
        in: path
        required: true
        description: The run's ID.
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 1
          maxLength: 18
      summary: Amazon HealthOmics Cancel Run
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
  '/import/variant/{jobId}':
    delete:
      operationId: CancelVariantImportJob
      description: Cancels a variant import job.
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/CancelVariantImportResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '482':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '483':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '484':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
      parameters:
      - name: jobId
        in: path
        required: true
        description: The job's ID.
        schema:
          type: string
          pattern: '[a-f0-9]{8}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{12}'
      summary: Amazon HealthOmics Cancel Variant Import Job
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
    get:
      operationId: GetVariantImportJob
      description: Gets information about a variant import job.
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/GetVariantImportResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '482':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '483':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '484':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
      parameters:
      - name: jobId
        in: path
        required: true
        description: The job's ID.
        schema:
          type: string
          pattern: '[a-f0-9]{8}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{12}'
      summary: Amazon HealthOmics Get Variant Import Job
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
  '/sequencestore/{sequenceStoreId}/upload/{uploadId}/complete':
    post:
      operationId: CompleteMultipartReadSetUpload
      description: ' Concludes a multipart upload once you have uploaded all the components. '
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/CompleteMultipartReadSetUploadResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: NotSupportedOperationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/NotSupportedOperationException'
        '482':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '483':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '484':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: sequenceStoreId
        in: path
        required: true
        description: ' The sequence store ID for the store involved in the multipart upload. '
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 10
          maxLength: 36
      - name: uploadId
        in: path
        required: true
        description: ' The ID for the multipart upload. '
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 10
          maxLength: 36
      requestBody:
        required: true
        content:
          application/json:
            schema:
              type: object
              required:
              - parts
              properties:
                parts:
                  description: ' The individual uploads or parts of a multipart upload. '
                  type: array
                  items:
                    $ref: '#/components/schemas/CompleteReadSetUploadPartListItem'
      summary: Amazon HealthOmics Complete Multipart Read Set Upload
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
  /annotationStore:
    post:
      operationId: CreateAnnotationStore
      description: Creates an annotation store.
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/CreateAnnotationStoreResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '482':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '483':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '484':
          description: ConflictException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ConflictException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
      parameters: []
      requestBody:
        required: true
        content:
          application/json:
            schema:
              type: object
              required:
              - storeFormat
              properties:
                reference:
                  description: A genome reference.
                  type: object
                  properties:
                    referenceArn:
                      allOf:
                      - $ref: '#/components/schemas/ReferenceArn'
                      - description: The reference's ARN.
                name:
                  description: A name for the store.
                  type: string
                  pattern: '([a-z]){1}([a-z0-9_]){2,254}'
                description:
                  description: A description for the store.
                  type: string
                  minLength: 0
                  maxLength: 500
                tags:
                  description: Tags for the store.
                  type: object
                  additionalProperties:
                    $ref: '#/components/schemas/TagValue'
                sseConfig:
                  description: Server-side encryption (SSE) settings for a store.
                  type: object
                  properties:
                    type:
                      allOf:
                      - $ref: '#/components/schemas/EncryptionType'
                      - description: The encryption type.
                    keyArn:
                      allOf:
                      - $ref: '#/components/schemas/SseConfigKeyArnString'
                      - description: An encryption key ARN.
                storeFormat:
                  description: The annotation file format of the store.
                  type: string
                  enum:
                  - GFF
                  - TSV
                  - VCF
                storeOptions:
                  description: Settings for a store.
                  type: object
                  properties:
                    tsvStoreOptions:
                      allOf:
                      - $ref: '#/components/schemas/TsvStoreOptions'
                      - description: File settings for a TSV store.
      summary: Amazon HealthOmics Create Annotation Store
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'
  '/sequencestore/{sequenceStoreId}/upload':
    post:
      operationId: CreateMultipartReadSetUpload
      description: ' Begins a multipart read set upload. '
      responses:
        '200':
          description: Success
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/CreateMultipartReadSetUploadResponse'
        '480':
          description: InternalServerException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/InternalServerException'
        '481':
          description: NotSupportedOperationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/NotSupportedOperationException'
        '482':
          description: ServiceQuotaExceededException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ServiceQuotaExceededException'
        '483':
          description: ThrottlingException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ThrottlingException'
        '484':
          description: ValidationException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ValidationException'
        '485':
          description: ResourceNotFoundException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/ResourceNotFoundException'
        '486':
          description: AccessDeniedException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/AccessDeniedException'
        '487':
          description: RequestTimeoutException
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/RequestTimeoutException'
      parameters:
      - name: sequenceStoreId
        in: path
        required: true
        description: ' The sequence store ID for the store that is the destination of the multipart uploads. '
        schema:
          type: string
          pattern: '[0-9]+'
          minLength: 10
          maxLength: 36
      requestBody:
        required: true
        content:
          application/json:
            schema:
              type: object
              required:
              - sourceFileType
              - subjectId
              - sampleId
              - referenceArn
              - name
              properties:
                clientToken:
                  description: ' An idempotency token that can be used to avoid triggering multiple multipart uploads. '
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 127
                sourceFileType:
                  description: ' The type of file being uploaded. '
                  type: string
                  enum:
                  - FASTQ
                  - BAM
                  - CRAM
                subjectId:
                  description: ' The source''s subject ID. '
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 127
                sampleId:
                  description: ' The source''s sample ID. '
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 127
                generatedFrom:
                  description: ' Where the source originated. '
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 127
                referenceArn:
                  description: ' The ARN of the reference. '
                  type: string
                  pattern: 'arn:.+'
                  minLength: 1
                  maxLength: 127
                name:
                  description: ' The name of the read set. '
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 127
                description:
                  description: ' The description of the read set. '
                  type: string
                  pattern: '[\p{L}||\p{M}||\p{Z}||\p{S}||\p{N}||\p{P}]+'
                  minLength: 1
                  maxLength: 255
                tags:
                  description: ' Any tags to add to the read set. '
                  type: object
                  additionalProperties:
                    $ref: '#/components/schemas/TagValue'
      summary: Amazon HealthOmics Create Multipart Read Set Upload
      x-microcks-operation:
        delay: 0
        dispatcher: FALLBACK
    parameters:
    - $ref: '#/components/parameters/X-Amz-Content-Sha256'
    - $ref: '#/components/parameters/X-Amz-Date'
    - $ref: '#/components/parameters/X-Amz-Algorithm'
    - $ref: '#/components/parameters/X-Amz-Credential'
    - $ref: '#/components/parameters/X-Amz-Security-Token'
    - $ref: '#/components/parameters/X-Amz-Signature'
    - $ref: '#/components/parameters/X-Amz-SignedHeaders'

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# Full source: https://raw.githubusercontent.com/api-evangelist/amazon-healthomics/refs/heads/main/openapi/amazon-healthomics-openapi.yaml